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# CITATION file created with {cffr} R package
# See also: https://docs.ropensci.org/cffr/
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cff-version: 1.2.0
message: 'To cite package "graph4lg" in publications use:'
type: software
license: GPL-2.0-only
title: 'graph4lg: Build Graphs for Landscape Genetics Analysis'
version: 1.8.0
identifiers:
- type: doi
  value: 10.32614/CRAN.package.graph4lg
abstract: Build graphs for landscape genetics analysis. This set of functions can
  be used to import and convert spatial and genetic data initially in different formats,
  import landscape graphs created with 'GRAPHAB' software (Foltete et al., 2012) <https://doi.org/10.1016/j.envsoft.2012.07.002>,
  make diagnosis plots of isolation by distance relationships in order to choose how
  to build genetic graphs, create graphs with a large range of pruning methods, weight
  their links with several genetic distances, plot and analyse graphs, compare them
  with other graphs. It uses functions from other packages such as 'adegenet' (Jombart,
  2008) <https://doi.org/10.1093/bioinformatics/btn129> and 'igraph' (Csardi et Nepusz,
  2006) <https://igraph.org/>. It also implements methods commonly used in landscape
  genetics to create graphs, described by Dyer et Nason (2004) <https://doi.org/10.1111/j.1365-294X.2004.02177.x>
  and Greenbaum et Fefferman (2017) <https://doi.org/10.1111/mec.14059>, and to analyse
  distance data (van Strien et al., 2015) <https://doi.org/10.1038/hdy.2014.62>.
authors:
- family-names: Savary
  given-names: Paul
  email: psavary@protonmail.com
  orcid: https://orcid.org/0000-0002-2104-9941
preferred-citation:
  type: article
  title: 'graph4lg: a package for constructing and analysing graphs for landscape
    genetics in R'
  authors:
  - family-names: Savary
    given-names: Paul
    email: psavary@protonmail.com
    orcid: https://orcid.org/0000-0002-2104-9941
  - family-names: Foltête
    given-names: Jean-Christophe
  - family-names: Moal
    given-names: Hervé
  - family-names: Vuidel
    given-names: Gilles
  - family-names: Garnier
    given-names: Stéphane
  journal: Methods in Ecology and Evolution
  year: '2020'
  volume: '00'
  issue: '1'
  url: https://besjournals.onlinelibrary.wiley.com/doi/abs/10.1111/2041-210X.13530
  start: '1'
  end: '9'
repository: https://psavary3.r-universe.dev
commit: 5de8af31ae9011793e7aaa6bc77a9e4c8e199002
date-released: '2023-01-30'
contact:
- family-names: Savary
  given-names: Paul
  email: psavary@protonmail.com
  orcid: https://orcid.org/0000-0002-2104-9941